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Simplification of rules on fermentation using GMMs

  • Food safety
  • Biotechnologies

Summary

Genetically modified micro-organisms (GMMs) can be used in fermentation to make food or animal feed. In these cases the micro-organisms are removed during production, but their residues (minute amounts of DNA fragments) may still remain in the final product. There has been some uncertainty about whether these food and feed products should be considered as “produced from genetically modified organisms (GMOs)” when GMM residues are present in the final products. If these products are considered to be “produced from GMOs”, they would need to be assessed and authorised under the EU’s GMO Regulation 1829/2003.

The European Commission proposes to clarify that food and feed produced using GMMs as production strains in fermentation processes should not be considered as “produced from GMOs”, as long as any remaining traces in the final product meet certain safety conditions.

European Commission to clarify which rules apply to foods produced using genetically modified micro-organisms

Proposal for a Regulation of the European Parliament and of the Council amending Regulations (EC) No 999/2001, (EC) No 1829/2003, (EC) No 1831/2003, (EC) No 852/2004, (EC) No 853/2004, (EC) No 396/2005, (EC) No 1099/2009, (EC) No 1107/2009, (EU) No 528/2012, (EU) 2017/625 as regards the simplification and strengthening of food and feed safety requirements

Update

Genetically modified micro-organisms (GMMs) can be used in fermentation to make food or animal feed. In these cases the micro-organisms are removed during production, but their residues (minute amounts of DNA fragments) may still remain in the final product. There has been some uncertainty about whether these food and feed products should be considered as “produced from genetically modified organisms (GMOs)” when GMM residues are present in the final products. If these products are considered to be “produced from GMOs”, they would need to be assessed and authorised under the EU’s GMO Regulation 1829/2003.

The European Commission proposes to clarify that food and feed produced using GMMs as production strains in fermentation processes should not be considered as “produced from GMOs”, as long as any remaining traces in the final product meet certain safety conditions.

Impacted Products

Food and feed additives, food enzymes, novel foods

What is changing?

Foods that “consist of or are produced from” GMOs have to be assessed and authorised before they can be put on the EU market (GMO Regulation 1829/2003).

Some foods and feeds are produced through a fermentation process using GMMs. These foods do not “consist of” GMOs and are not “produced from” GMOs, but they are “produced using” GMMs that are later removed during the production process. However, residues of the GMMs may remain in the final product.

There is uncertainty under current rules whether foods produced using GMMs require authorisation under the GMO Regulation.

The European Commission proposes to clarify that the term “produced from GMOs” does not include food and feed products produced using GMMs as production strains if those micro-organisms are not present in the final product. If final products contain residues of the GMMs, those residues must:

  • be limited to non-viable cells (cells that cannot grow, divide, or reproduce)
  • be reduced to a minimum by making reasonable attempts to remove them in accordance with good manufacturing practice
  • have no technological effect on the food or feed.

Under this proposal, the safety of food and feed produced using GMMs does not need to be assessed under the GMO Regulation. In each case, the safety of each product type will be assessed under the relevant Regulation:

Why?

Competent authorities of EU Member States have adopted different interpretations on the legality of GMM residues in final products. Some consider that these products should not be considered GM foods, while others currently require them to be authorised under the GMO Regulation and have therefore removed unauthorised products that contain GMM residues from the market. This inconsistency has created uncertainty for producers of food and feed. Uncertainty has been aggravated by increasingly sensitive analysis that more frequently identifies minute amounts of DNA.

GMM fermentation processes are of growing importance to the European food and feed sectors. This initiative is part of a broader EU strategy aimed at strengthening the competitiveness of the European biotechnology sector (European Commission 2024, 2025).

Timeline

This proposal will be discussed by the Council of the EU (Member States) and the European Parliament, a process that can take up to 2 years. So its application is possible in the second half of 2027.

Background

The EU defines a GMM as “a micro-organism in which the genetic material has been altered in a way that does not occur naturally by mating and/or natural recombination” (Directive 2009/41/EC, Art. 2(b)).

Resources

European Commission (2024) Building the future with nature: Boosting biotechnology and biomanufacturing in the EU

European Commission (2025) Choose Europe for life sciences: A strategy to position the EU as the world’s most attractive place for life sciences by 2030

Regulation (EC) No 1829/2003 on genetically modified food and feed

Directive 2009/41/EC on the contained use of genetically modified micro-organisms

Regulation (EC) No 1831/2003 on additives for use in animal nutrition

Regulation (EC) No 1333/2008 on food additives

Regulation (EC) No 1334/2008 on flavourings and certain food ingredients with flavouring properties for use in and on foods

Regulation (EU) 2015/2283 on novel foods

Sources

Proposal for a Regulation amending Regulations 999/2001, 1829/2003, 1831/2003, 852/2004, 853/2004, 396/2005, 1099/2009, 1107/2009, 528/2012, 2017/625 as regards the simplification and strengthening of food and feed safety requirements

Disclaimer: Under no circumstances shall COLEAD be liable for any loss, damage, liability or expense incurred or suffered that is claimed to have resulted from the use of information available on this website or any link to external sites. The use of the website is at the user’s sole risk and responsibility. This information platform was created and maintained with the financial support of the European Union. Its contents do not, however, reflect the views of the European Union.

European Commission to clarify which rules apply to foods produced using genetically modified micro-organisms

Proposal for a Regulation amending Regulations 999/2001, 1829/2003, 1831/2003, 852/2004, 853/2004, 396/2005, 1099/2009, 1107/2009, 528/2012, 2017/625 as regards the simplification and strengthening of food and feed safety requirements

What is changing and why?

Genetically modified micro-organisms (GMMs) can be used in fermentation to make food or animal feed. In these cases the micro-organisms are removed during production, but their residues may still remain in the final product. There has been some uncertainty among food companies and European Union (EU) authorities about whether these food and feed products should be considered as “produced from genetically modified organisms (GMOs)” – in which case they would need to be assessed and authorised under the EU’s GMO Regulation.

The European Commission proposes to remove this confusion by clarifying that food and feed produced using GMMs in fermentation processes should not be considered as “produced from GMOs”, as long as any remaining traces in the final product meet certain safety conditions.

Timeline

This proposal will be discussed by the Council of the EU (Member States) and the European Parliament, a process that can take up to 2 years. So its application is possible in the second half of 2027.

Disclaimer: Under no circumstances shall COLEAD be liable for any loss, damage, liability or expense incurred or suffered that is claimed to have resulted from the use of information available on this website or any link to external sites. The use of the website is at the user’s sole risk and responsibility. This information platform was created and maintained with the financial support of the European Union. Its contents do not, however, reflect the views of the European Union.